* using log directory 'd:/Rcompile/CRANpkg/local/4.5/visR.Rcheck'
* using R Under development (unstable) (2024-06-10 r86715 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'visR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'visR' version '0.4.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'visR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s] OK
* checking whether the package can be unloaded cleanly ... [2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s] OK
* checking loading without being on the library search path ... [2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [9s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [22s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [105s] ERROR
  Running 'spelling.R' [0s]
  Running 'testthat.R' [105s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(visR)
  > library(vdiffr)
  > library(survival)
  > 
  > test_check("visR")
  [ FAIL 1 | WARN 28 | SKIP 28 | PASS 1001 ]
  
  ══ Skipped tests (28) ══════════════════════════════════════════════════════════
  • On CRAN (27): 'test-add_CI.R:30:3', 'test-add_CI.R:45:3',
    'test-add_CI.R:65:3', 'test-add_CI.R:95:3', 'test-add_CI.R:124:3',
    'test-add_CI.R:144:3', 'test-add_CNSR.R:34:3', 'test-add_CNSR.R:47:3',
    'test-add_CNSR.R:60:3', 'test-add_CNSR.R:78:3', 'test-add_CNSR.R:95:3',
    'test-add_CNSR.R:112:3', 'test-add_highlight.R:107:3',
    'test-add_highlight.R:151:3', 'test-add_highlight.R:281:3',
    'test-add_risktable.R:81:3', 'test-add_risktable.R:93:3',
    'test-add_risktable.R:204:3', 'test-add_risktable.R:214:3',
    'test-stat_stepribbon.R:32:3', 'test-stat_stepribbon.R:60:3',
    'test-stat_stepribbon.R:94:3', 'test-stat_stepribbon.R:117:3',
    'test-utils_visR.R:139:3', 'test-utils_visR.R:150:3',
    'test-visr_survfit.R:528:3', 'test-watchdog_testfiles.R:14:1'
  • utils::packageVersion("ggplot2") >= "3.5.0" is TRUE (1):
    'test-utils_visR.R:97:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-tidyme.R:138:3'): T3.2 The S3 method, associated with a `survfit` object, has columns representing all list elements of the S3 object ──
  surv_object_df %>% dplyr::select(-call) not equal to survfit_object_tidy %>% dplyr::select(-call).
  Length mismatch: comparison on first 22 components
  Component 15: target is character, current is numeric
  Component 16: 164 string mismatches
  Component 17: target is numeric, current is character
  Component 18: Mean relative difference: 4.077603
  Component 19: Mean relative difference: 0.9152565
  Component 20: Mean relative difference: 0.280564
  Component 21: 'current' is not a factor
  Component 22: target is numeric, current is factor
  
  [ FAIL 1 | WARN 28 | SKIP 28 | PASS 1001 ]
  Error: Test failures
  In addition: Warning message:
  In for (i in seq_len(nrow(theme))) { :
    closing unused connection 4 (https://raw.githubusercontent.com/vntkumar8/covid-survival/main/data/final.csv)
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [30s] OK
* checking PDF version of manual ... [23s] OK
* checking HTML version of manual ... [7s] OK
* DONE
Status: 1 ERROR